- s -
- s : boost::hash< RTpieCpp::InstanceHandle >::conv, boost::hash< RTpieCpp::MeshHandle >::conv
- salt_bridge_atom : BALL::PDB::RecordCONECT
- saltbridges : BALL::PDB::Structure::ConectAtomList, BALL::PDB::Structure
- same_energy_counter_ : BALL::EnergyMinimizer
- samples : BALL::NMRStarFile::NMRAtomDataSet
- SAMPLES : BALL::Pair6_12RDFIntegrator::Default, BALL::Pair6_12RDFIntegrator::Option, BALL::PairExpRDFIntegrator::Default, BALL::PairExpRDFIntegrator::Option
- sampling_rate_ : BALL::CCP4File, BALL::DSN6File
- sas_ : BALL::TriangulatedSAS
- SAS_grid : BALL::FDPB
- save_file : BALL::VIEW::TestFramework
- save_id_ : BALL::VIEW::MolecularFileDialog
- save_images_ : BALL::VIEW::MDSimulationThread
- SAVE_ONLY_SUMS : BALL::MolecularInteractions
- save_project_action_ : BALL::Mainframe
- saved_position_ : BALL::AtomVector
- saveframe : BALL::CIFFile::Datacontent
- saveframe_categories : BALL::CIFFile::Datablock
- saveframe_names : BALL::CIFFile::Datablock
- sbmb : BALL::MMFF94AtomType, BALL::MMFF94StretchBend::Stretch
- sbmb_exists : BALL::MMFF94StretchParameters::BondData
- sbtijk : BALL::MMFF94StretchBend::StretchBend
- scaling_ : BALL::VIEW::ForceModel
- SCALING_ELECTROSTATIC_1_4 : BALL::AmberFF::Default, BALL::AmberFF::Option, BALL::CharmmFF::Default, BALL::CharmmFF::Option
- SCALING_VDW_1_4 : BALL::AmberFF::Default, BALL::AmberFF::Option, BALL::CharmmFF::Default, BALL::CharmmFF::Option
- scalingUsed : BALL::VIEW::VRMLRenderer
- scene_ : BALL::Mainframe, BALL::VIEW::AnimationThread, BALL::VIEW::InteractionMode, BALL::VIEW::InteractionModeManager, BALL::VIEW::LightSettings, BALL::VIEW::Renderer, BALL::VIEW::RenderSetup
- score_ : BALL::ScoringComponent, BALL::ScoringFunction
- score_contribution_names : BALL::ScoringOptimizer::Result
- score_contributions : BALL::ScoringOptimizer::Result
- SCOREGRID_INTERPOLATION : BALL::GridBasedScoring::Default, BALL::GridBasedScoring::Option
- scoregrid_interpolation_ : BALL::GridBasedScoring
- SCOREGRID_RESOLUTION : BALL::GridBasedScoring::Default, BALL::GridBasedScoring::Option
- scoregrid_resolution_ : BALL::GridBasedScoring
- scores_ : BALL::DockResult::Scoring_
- scoring_components_ : BALL::ScoringFunction
- scoring_function_ : BALL::Constraint, BALL::DockingAlgorithm, BALL::DockProblem, BALL::GridAnalysis, BALL::Rescoring, BALL::ScoringComponent
- SCORING_TOLERANCE : BALL::AromaticRingStacking::Default, BALL::AromaticRingStacking::Option
- SCORING_TYPE : BALL::EvolutionaryDocking::Default, BALL::EvolutionaryDocking::Option, BALL::IMGDock::Default, BALL::IMGDock::Option
- scoring_type_ : BALL::DockingAlgorithm
- scorings_ : BALL::DockResult
- screenshot_nr_ : BALL::VIEW::Scene
- script_edit_ : BALL::VIEW::PyWidget
- script_mode_ : BALL::VIEW::PyWidget
- script_output_ : BALL::VIEW::PyWidget
- SCWRL_4_0 : BALL::SideChainPlacementProcessor::Method
- SCWRL_BINARY_PATH : BALL::SideChainPlacementProcessor::Default, BALL::SideChainPlacementProcessor::Option
- SCWRL_INPUT_FILE : BALL::SideChainPlacementProcessor::Default, BALL::SideChainPlacementProcessor::Option
- SCWRL_OUTPUT_FILE : BALL::SideChainPlacementProcessor::Default, BALL::SideChainPlacementProcessor::Option
- SCWRL_SEQUENCE_FILE : BALL::SideChainPlacementProcessor::Default, BALL::SideChainPlacementProcessor::Option
- sd_file : BALL::QSAR::InputConfiguration
- sd_systems_ : BALL::VIEW::AssignBondOrderResultsDialog, BALL::VIEW::PubChemDialog
- sdwidget_ : BALL::VIEW::AssignBondOrderResultsDialog
- sec_axis_ : BALL::CCP4File
- sec_struct : BALL::PDB::Structure::AtomEntry
- sec_structs : BALL::PDB::Structure
- second : BALL::Quadruple< T1, T2, T3, T4 >, BALL::Triple< T1, T2, T3 >
- second_ : BALL::Addition< First, Second, DataType >, BALL::Bond, BALL::Division< First, Second, DataType >, BALL::Product< First, Second, DataType >, BALL::SmartsParser::SPEdge, BALL::Subtraction< First, Second, DataType >
- second_atom : BALL::MOLFile::BondStruct, BALL::PDB::RecordLINK, BALL::PDB::RecordSLTBRG
- second_atom_expressions_ : BALL::EFShiftProcessor
- second_edge_ : BALL::SmartsParser::SPEdge, BALL::SmartsParser::SPNode
- second_non_hydrogen_atom : BALL::PDB::RecordHYDBND
- secs_ : BALL::PreciseTime
- section_entries_ : BALL::ParameterSection
- section_index_ : BALL::INIFile
- section_name_ : BALL::ParameterSection
- sections_ : BALL::INIFile
- segment_ID : BALL::PDB::RecordANISOU, BALL::PDB::RecordATOM, BALL::PDB::RecordHETATM, BALL::PDB::RecordSIGATM, BALL::PDB::RecordSIGUIJ
- select_action_ : BALL::VIEW::MolecularControl
- select_id_ : BALL::VIEW::MolecularControl
- selected_ : BALL::GeneticAlgorithm, BALL::Selectable, BALL::VIEW::MolecularControl
- selected_atoms_ : BALL::Selector
- selected_color : BALL::VIEW::ModifyRepresentationDialog
- selected_coloring_method_ : BALL::VIEW::MolecularControl
- selected_model_ : BALL::PDBFile, BALL::VIEW::MolecularControl
- selection_ : BALL::ResidueChecker, BALL::VIEW::MainControl
- selection_color_ : BALL::VIEW::ColorProcessor
- selection_enabled_ : BALL::ForceField
- selection_name : BALL::QSAR::FeatureSelectionConfiguration
- selector_edit_ : BALL::VIEW::MolecularControl
- send_buffer : BALL::RingPerceptionProcessor::TNode_
- sense_of_strand : BALL::PDB::RecordSHEET
- separate_activity_file : BALL::QSAR::InputConfiguration
- SEPARATOR : BALL::ResourceFile
- seq_identity : BALL::NMRStarFile::MonomericPolymer::HomologDB
- seq_positive : BALL::NMRStarFile::MonomericPolymer::HomologDB
- seq_to_submitted_percentage : BALL::NMRStarFile::MonomericPolymer::HomologDB
- seqres_records : BALL::PDB::BookKeeping
- sequence_ : BALL::Peptides::PeptideBuilder
- sequence_database_accession_code : BALL::PDB::RecordDBREF
- sequence_database_ID_code : BALL::PDB::RecordDBREF
- sequence_database_name : BALL::PDB::RecordDBREF
- sequence_number : BALL::PDB::RecordSITE, BALL::PDB::RecordTURN, BALL::PDB::Residue
- sequence_number_ : BALL::PDBFile
- serial_number : BALL::PDB::RecordANISOU, BALL::PDB::RecordATOM, BALL::PDB::RecordHELIX, BALL::PDB::RecordHETATM, BALL::PDB::RecordMTRIX1, BALL::PDB::RecordMTRIX2, BALL::PDB::RecordMTRIX3, BALL::PDB::RecordSEQRES, BALL::PDB::RecordSIGATM, BALL::PDB::RecordSIGUIJ, BALL::PDB::RecordSSBOND, BALL::PDB::RecordTER, BALL::PDB::RecordTVECT, BALL::PDB::Structure::ConectAtomList
- server_ : BALL::PyInterpreter
- ses_ : BALL::SESComputer, BALL::SESSingularityCleaner, BALL::TriangulatedSES
- sets_ : BALL::MOL2File
- setup_time_stamp_ : BALL::ForceField
- sg_entry_ : BALL::VIEW::GenerateCrystalDialog
- sg_list_ : BALL::VIEW::GenerateCrystalDialog
- sg_symops_ : BALL::CrystalInfo
- share_from_ : BALL::VIEW::GLOffscreenTarget
- shared_bonds : BALL::RingAnalyser::Ring
- shared_handlers_ : BALL::PluginManager
- sheet_ : BALL::SecondaryStructureProcessor
- sheet_ID : BALL::PDB::RecordSHEET
- sheet_list_ : BALL::PDBFile
- sheet_records : BALL::PDB::BookKeeping
- shift_map_ : BALL::RandomCoilShiftProcessor
- shift_s_ : BALL::ShiftedLVMMMinimizer
- shift_units : BALL::NMRStarFile::ShiftReferenceElement
- shift_value : BALL::NMRStarFile::NMRAtomData, BALL::NMRStarFile::ShiftReferenceElement
- shifted_direction_ : BALL::ShiftedLVMMMinimizer
- shifts : BALL::NMRStarFile::MolecularSystem::ChemicalUnit
- ShiftXwise_hydrogen_bonds_computation_ : BALL::HBondShiftProcessor
- shininess : BALL::VIEW::Stage::Material
- shortcut_ : BALL::VIEW::TestFramework
- shortcut_keys_ : BALL::VIEW::ShortcutRegistry
- shortcut_registry_ : BALL::VIEW::MainControl
- shortcuts_ : BALL::VIEW::ShortcutRegistry
- show_coordinate_system_ : BALL::VIEW::Stage
- show_error_ : BALL::VIEW::HTMLViewDock
- show_fps_ : BALL::VIEW::Scene
- SHOW_HYDROGENS : BALL::SDGenerator::Default, BALL::SDGenerator::Option, BALL::VIEW::SDWidget::Default, BALL::VIEW::SDWidget::Option
- SHOW_IDENTICAL_LIGANDS_WARNING : BALL::DockResultFile
- show_light_sources_ : BALL::VIEW::Renderer, BALL::VIEW::Scene
- show_preview_ : BALL::VIEW::Renderer
- show_ruler_ : BALL::VIEW::RenderSetup
- show_selection_infos_ : BALL::VIEW::CompositeMessage
- show_ss_ : BALL::VIEW::MolecularControl
- show_ss_id_ : BALL::VIEW::MolecularControl
- show_window_enty_ : BALL::VIEW::ModularWidget
- sig11 : BALL::PDB::RecordSIGUIJ
- sig12 : BALL::PDB::RecordSIGUIJ
- sig13 : BALL::PDB::RecordSIGUIJ
- sig22 : BALL::PDB::RecordSIGUIJ
- sig23 : BALL::PDB::RecordSIGUIJ
- sig33 : BALL::PDB::RecordSIGUIJ
- sig_w : BALL::CharmmEEF1::Values
- sig_w_ : BALL::CharmmEEF1
- silent_ : BALL::VIEW::PyWidget
- SIM_CUTOFF : BALL::BinaryFingerprintMethods::Default, BALL::BinaryFingerprintMethods::Option
- SIMPLE : BALL::AStarBondOrderStrategy::Heuristic
- simulation_icon_ : BALL::VIEW::MainControl
- simulation_running_xpm_ : BALL::VIEW::MainControl
- simulation_stoped_xpm_ : BALL::VIEW::MainControl
- simulation_thread_ : BALL::VIEW::MainControl
- single_pick_ : BALL::VIEW::GLRenderer
- singular_ : BALL::RSEdge, BALL::RSFace
- singular_edges_ : BALL::SolventExcludedSurface
- site_records : BALL::PDB::BookKeeping
- size : BALL::PoseClustering::ClusterProperties
- size_ : BALL::Exception::IndexOverflow, BALL::Exception::IndexUnderflow, BALL::Exception::InvalidSize, BALL::Exception::OutOfMemory, BALL::Exception::SizeUnderflow, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >
- sizeX_ : BALL::Rescoring3D
- sizeY_ : BALL::Rescoring3D
- sizeZ_ : BALL::Rescoring3D
- skip_checks_ : BALL::VIEW::HTMLViewDock
- skipped_records_ : BALL::PDBInfo
- SLAVE_PATH : BALL::GeometricFit::Default, BALL::GeometricFit::Option
- slices : BALL::VIEW::GridVisualisation
- slides_ : BALL::VIEW::AddBackboneModel
- slides_angle_ : BALL::VIEW::AddBackboneModel
- smallX : BALL::VIEW::VRMLRenderer
- smallY : BALL::VIEW::VRMLRenderer
- smallZ : BALL::VIEW::VRMLRenderer
- SMART_MATCHING : BALL::HybridisationProcessor::Method
- smart_names_ : BALL::MolecularSimilarity
- smart_pointer_list_ : BALL::PersistenceManager
- smarts_ : BALL::MolecularSimilarity
- smarts_edit_ : BALL::VIEW::MolecularControl
- smiles : BALL::VIEW::PubChemDialog::ParsedResult_
- smiles_parser_ : BALL::VIEW::PubChemDialog
- smooth_lines_ : BALL::VIEW::GLRenderer
- snap : BALL::PoseClustering::PosePointer
- snap_shot_manager_ : BALL::VIEW::SnapshotVisualisationDialog
- snapshot_ : BALL::EnergyMinimizer
- snapshot_buffer_ : BALL::SnapShotManager
- SNAPSHOT_FREQUENCY : BALL::EnergyMinimizer::Default, BALL::EnergyMinimizer::Option, BALL::MolecularDynamics::Default, BALL::MolecularDynamics::Option
- snapshot_frequency_ : BALL::EnergyMinimizer, BALL::MolecularDynamics
- snapshot_interface_ : BALL::VIEW::UndoManagerDialog
- snapshot_manager_ptr_ : BALL::MolecularDynamics
- snapshot_order_ : BALL::ConformationSet, BALL::DockResult::Scoring_
- soffsetf1_ : BALL::Bruker2DFile
- soffsetf2_ : BALL::Bruker2DFile
- SOLUTE_DC : BALL::FDPB::Default, BALL::FDPB::Option
- solution_number_ : BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_, BALL::VIEW::AssignBondOrderResultsDialog
- solution_systems_ : BALL::VIEW::AssignBondOrderResultsDialog
- solutions_ : BALL::AssignBondOrderProcessor, BALL::Kekuliser
- SOLVATION_CUTOFF : BALL::CharmmFF::Default, BALL::CharmmFF::Option
- SOLVATION_CUTON : BALL::CharmmFF::Default, BALL::CharmmFF::Option
- solvation_energy_ : BALL::CharmmNonBonded
- solvation_parameters : BALL::Solvation
- solvation_volumes : BALL::Solvation
- solvent_ : BALL::Pair6_12InteractionEnergyProcessor, BALL::PairExpInteractionEnergyProcessor
- solvent_atoms_ : BALL::SolventDescriptor, BALL::SolventParameter
- SOLVENT_DC : BALL::FDPB::Default, BALL::FDPB::Option
- solvent_descriptor_ : BALL::SolventParameter
- SOLVENT_DESCRIPTOR_FILE : BALL::NonpolarSolvation::Default, BALL::NonpolarSolvation::Option
- SOLVENT_FILENAME : BALL::Pair6_12InteractionEnergyProcessor::Default, BALL::Pair6_12InteractionEnergyProcessor::Option, BALL::PairExpInteractionEnergyProcessor::Default, BALL::PairExpInteractionEnergyProcessor::Option
- SOLVENT_NUMBER_DENSITY : BALL::NonpolarSolvation::Default, BALL::NonpolarSolvation::Option, BALL::Pair6_12InteractionEnergyProcessor::Default, BALL::Pair6_12InteractionEnergyProcessor::Option, BALL::PCMCavFreeEnergyProcessor::Default, BALL::PCMCavFreeEnergyProcessor::Option, BALL::PierottiCavFreeEnergyProcessor::Default, BALL::PierottiCavFreeEnergyProcessor::Option, BALL::ReissCavFreeEnergyProcessor::Default, BALL::ReissCavFreeEnergyProcessor::Option
- sorted_by_ : BALL::DockResult
- sorted_edges : BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
- source_ : BALL::EdgeItem< Node, Edge >
- sources : BALL::PDB::RecordSOURCE
- sp_atom_ : BALL::SmartsParser::SPNode
- space_group : BALL::PDB::RecordCRYST1::UnitCell, BALL::PDB::Structure::UnitCellInfo
- space_group_ : BALL::CCP4File, BALL::CrystalInfo
- SPACE_GROUP_FILE : BALL::CrystalGenerator::Default, BALL::CrystalGenerator::Option, BALL::CrystalInfo::Default, BALL::CrystalInfo::Option
- SPACING : BALL::FDPB::Default, BALL::FDPB::Option
- spacing_ : BALL::FDPB, BALL::ShiftModel1D, BALL::ShiftModel2D, BALL::Spectrum< DataT, PeakT, PositionT >, BALL::TContourSurface< T >::Cube, BALL::TRegularData1D< ValueType >, BALL::TRegularData2D< ValueType >, BALL::TRegularData3D< ValueType >
- specific_model_ID : BALL::PDB::RecordCISPEP
- spectrum_ : BALL::Bruker1DFile, BALL::Bruker2DFile
- specular_color : BALL::VIEW::Stage::Material
- specular_intensity : BALL::VIEW::Stage::Material
- SPEED_OF_LIGHT : BALL::Constant
- sphere_ : BALL::SASFace
- sphere_list_ : BALL::VIEW::GLRenderer
- sphere_template_ : BALL::VIEW::XML3DRenderer
- spheres_ : BALL::SurfaceProcessor
- spheric_faces_ : BALL::SolventExcludedSurface
- spointnumf1_ : BALL::Bruker2DFile
- spointnumf2_ : BALL::Bruker2DFile
- sqrt_density_ : BALL::SASTriangulator, BALL::SESTriangulator
- square_distance_ : BALL::VIEW::ModifyRepresentationDialog
- squared_distance_ : BALL::FragmentDistanceCollector
- ss_ : BALL::VIEW::AddBackboneModel
- ssbond_correction_ : BALL::EmpiricalHSShiftProcessor
- ssbond_list_ : BALL::PDBFile
- ssbonds : BALL::PDB::Structure
- sssr_ : BALL::GAFFTypeProcessor, BALL::SmartsMatcher, BALL::SmartsParser
- stack_pages_ : BALL::VIEW::PreferencesEntry
- stage_ : BALL::VIEW::LightSettings, BALL::VIEW::Renderer, BALL::VIEW::RenderSetup, BALL::VIEW::Scene
- stage_settings_ : BALL::VIEW::Scene
- standard_bond_exists : BALL::MMFF94StretchParameters::BondData
- STANDARD_BOND_LENGTH : BALL::SDGenerator::Default, BALL::SDGenerator::Option
- standard_occupancy_deviation : BALL::PDB::RecordSIGATM
- standard_residue_name : BALL::PDB::RecordMODRES
- standard_temperature_deviation : BALL::PDB::RecordSIGATM
- standard_vector_deviation : BALL::PDB::RecordSIGATM
- standardized_moments : BALL::Spectrum< DataT, PeakT, PositionT >
- start_ : BALL::CCP4File, BALL::DSN6File, BALL::TContour< T >
- start_action_ : BALL::VIEW::FileObserver
- start_animation_action_ : BALL::VIEW::Scene
- start_recording : BALL::VIEW::TestFramework
- started_startup_script_ : BALL::VIEW::PyWidget
- starting_configuration_ : BALL::AssignBondOrderProcessor
- startup_script_ : BALL::VIEW::PyWidget
- state : BALL::CIFFile, BALL::ExpressionParser, BALL::GAFFCESParser, BALL::GAMESSDatFile, BALL::GAMESSLogFile, BALL::SmartsParser, BALL::SmilesParser, BALL::TreeWidthImplementation< UndirectedGraph >::QuickBB< Lowerbound, Upperbound >, BALL::VIEW::RunPythonThread
- static_ligand_energy_ : BALL::ScoringFunction
- static_ligand_fragments_ : BALL::ScoringFunction
- static_members : BALL::MOL2File::SetStruct
- static_residues_hashgrid_ : BALL::ScoringFunction
- statistic : BALL::QSAR::FeatureSelectionConfiguration, BALL::QSAR::PredictionConfiguration, BALL::QSAR::ValidationConfiguration
- statistic_name : BALL::QSAR::FeatureSelectionConfiguration, BALL::QSAR::PredictionConfiguration, BALL::QSAR::ValidationConfiguration
- status : BALL::MOL2File::SetStruct, BALL::RSComputer::ProbePosition
- status_ : BALL::ResidueChecker
- stddev_ : BALL::ScoringComponent
- stddev_out_ : BALL::Rescoring
- step_ : BALL::AStarBondOrderStrategy, BALL::EnergyMinimizer
- step_number_of_starting_time_ : BALL::DCDFile
- STEP_WIDTH : BALL::IMGDock::Default, BALL::IMGDock::Option
- step_width_ : BALL::RotamerLibrary
- stepFourier_ : BALL::TFFT1D< ComplexTraits >
- stepFourierX_ : BALL::TFFT2D< ComplexTraits >, BALL::TFFT3D< ComplexTraits >
- stepFourierY_ : BALL::TFFT2D< ComplexTraits >, BALL::TFFT3D< ComplexTraits >
- stepFourierZ_ : BALL::TFFT3D< ComplexTraits >
- stepPhys_ : BALL::TFFT1D< ComplexTraits >
- stepPhysX_ : BALL::TFFT2D< ComplexTraits >, BALL::TFFT3D< ComplexTraits >
- stepPhysY_ : BALL::TFFT2D< ComplexTraits >, BALL::TFFT3D< ComplexTraits >
- stepPhysZ_ : BALL::TFFT3D< ComplexTraits >
- steps_ : BALL::VIEW::MDSimulationThread
- steps_between_saves_ : BALL::DCDFile
- steps_between_updates_ : BALL::VIEW::SimulationThread
- stereo : BALL::MOLFile::BondStruct
- stereo_ : BALL::VIEW::Renderer
- stereo_camera_ : BALL::VIEW::Scene
- stereo_care_box : BALL::MOLFile::AtomStruct
- stereo_delta_ : BALL::VIEW::GLRenderWindow
- stereo_frustum_conversion_height_ : BALL::VIEW::Renderer
- stereo_frustum_conversion_width_ : BALL::VIEW::Renderer
- stereo_left_eye_ : BALL::VIEW::Scene
- stereo_mode_ : BALL::VIEW::InteractionModeManager
- stereo_right_eye_ : BALL::VIEW::Scene
- stereo_setup_ : BALL::VIEW::RenderSetup
- sticks_ : BALL::Spectrum< DataT, PeakT, PositionT >
- still_to_notify_ : BALL::VIEW::RepresentationManager
- stop_action_ : BALL::VIEW::FileObserver
- stop_animation_ : BALL::VIEW::Scene
- stop_recording : BALL::VIEW::TestFramework
- stop_script_ : BALL::VIEW::PyWidget
- stop_simulation_ : BALL::VIEW::MainControl
- stop_simulation_action_ : BALL::VIEW::MainControl
- store_interactions_ : BALL::ScoringFunction
- store_interactions_disabled_ : BALL::Atom
- store_interactions_phC_only_ : BALL::ScoringFunction
- STORE_NN : BALL::BinaryFingerprintMethods::Default, BALL::BinaryFingerprintMethods::Option
- STORE_SKIPPED_RECORDS : BALL::PDBFile::Default, BALL::PDBFile::Option
- store_skipped_records_ : BALL::PDBFile
- stored_camera_ : BALL::VIEW::Scene
- stored_s_ : BALL::StrangLBFGSMinimizer
- stored_y_ : BALL::StrangLBFGSMinimizer
- stptol_ : BALL::LineSearch
- strand_height_ : BALL::VIEW::AddCartoonModel
- strand_number : BALL::PDB::RecordSHEET
- strand_width_ : BALL::VIEW::AddCartoonModel
- strategies_ : BALL::AssignBondOrderProcessor
- stream : BALL::LogStreamBuf::StreamStruct
- stream_ : BALL::LogStreamNotifier
- STREAM_HEADER : BALL::XDRPersistenceManager
- stream_list_ : BALL::LogStreamBuf
- STREAM_TRAILER : BALL::XDRPersistenceManager
- stretch_ : BALL::StretchComponent
- stretch_i_j : BALL::MMFF94StretchBend::StretchBend
- stretch_j_k : BALL::MMFF94StretchBend::StretchBend
- stretch_parameters_ : BALL::StretchComponent
- STRICT_LINE_CHECKING : BALL::PDBFile::Default, BALL::PDBFile::Option
- strict_line_checking_ : BALL::PDBFile
- stride_ : BALL::VIEW::BufferedRenderer
- string : BALL::PDB::RecordTypeFormat
- string_format : BALL::VIEW::PythonHighlighter
- string_pattern : BALL::VIEW::PythonHighlighter
- string_value : BALL::JCAMPFile::JCAMPValue
- stringToWildcard_ : BALL::GAFFCESParser::CESPredicate
- STRUCTURE_BASED : BALL::HybridisationProcessor::Method
- structures_ : BALL::ConformationSet
- sub_type : BALL::MOL2File::SetStruct, BALL::MOL2File::SubstructureStruct
- subcategories_ : BALL::Options
- SUBCATEGORY_NAME : BALL::ScoringFunction
- subject_length : BALL::NMRStarFile::MonomericPolymer::HomologDB
- submission_date : BALL::NMRStarFile::EntryInformation
- substance_names_ : BALL::QSAR::Model, BALL::QSAR::QSARData
- substances_names_ : BALL::QSAR::Validation
- substructure : BALL::MOL2File::AtomStruct
- substructure_name : BALL::MOL2File::AtomStruct
- substructure_type : BALL::MOL2File::SubstructureStruct
- substructures_ : BALL::MOL2File
- suffix_ : BALL::VIEW::DownloadPDBFile
- sulfur_bridges_ : BALL::DisulfidBondProcessor
- summary_ : BALL::SecondaryStructureProcessor
- SUPERPOSE_LIGAND : BALL::IMGDock::Default, BALL::IMGDock::Option
- supported_formats : BALL::ParamFile::ParameterDescription
- surface_ : BALL::NumericalSAS, BALL::SurfaceProcessor
- surface_drawing_precision_ : BALL::VIEW::ModelProcessor, BALL::VIEW::Representation
- SURFACE_FILENAME : BALL::Pair6_12InteractionEnergyProcessor::Default, BALL::Pair6_12InteractionEnergyProcessor::Option, BALL::PairExpInteractionEnergyProcessor::Default, BALL::PairExpInteractionEnergyProcessor::Option
- SURFACE_TENSION : BALL::NonpolarSolvation::Default, BALL::NonpolarSolvation::Option, BALL::UhligCavFreeEnergyProcessor::Default, BALL::UhligCavFreeEnergyProcessor::Option
- SURFACE_THICKNESS : BALL::GeometricFit::Default, BALL::GeometricFit::Option
- SURFACE_TYPE : BALL::GeometricFit::Default, BALL::GeometricFit::Option, BALL::Pair6_12InteractionEnergyProcessor::Default, BALL::Pair6_12InteractionEnergyProcessor::Option, BALL::PairExpInteractionEnergyProcessor::Default, BALL::PairExpInteractionEnergyProcessor::Option
- surface_type_ : BALL::SurfaceProcessor
- SURVIVORS : BALL::EvolutionaryDocking::Default, BALL::EvolutionaryDocking::Option
- survivors_ : BALL::GeneticAlgorithm
- swap_bytes_ : BALL::CCP4File, BALL::DCDFile, BALL::DSN6File
- swap_endian_ : BALL::BinaryFileAdaptor< T >
- swap_side_by_side_stereo_ : BALL::VIEW::Stage
- swidthf1_ : BALL::Bruker2DFile
- swidthf2_ : BALL::Bruker2DFile
- switch_grid_ : BALL::VIEW::Scene
- switch_move : BALL::VIEW::TestFramework
- sym_size : BALL::TRRFile::TRRHeader
- symbol : BALL::MOLFile::AtomStruct, BALL::PTE_::SymbolToElement
- symmetry_group_ : BALL::GAMESSDatFile
- symmetry_operator : BALL::PDB::RecordSSBOND
- symops_ : BALL::SpaceGroupParameters
- syntax_tree_ : BALL::ExpressionParser
- sys_path_ : BALL::PyInterpreter
- system : BALL::GAMESSLogFile
- system1_ : BALL::DockingAlgorithm
- system2_ : BALL::DockingAlgorithm
- system_ : BALL::ConformationSet, BALL::CrystalGenerator, BALL::ForceField, BALL::SDGenerator, BALL::ShiftModel1D, BALL::ShiftModel2D, BALL::SmilesParser, BALL::VIEW::FDPBDialog, BALL::VIEW::GenerateCrystalDialog, BALL::VIEW::SDWidget
- system_backup_a_ : BALL::GeometricFit
- system_backup_b_ : BALL::GeometricFit
- system_i_ : BALL::PoseClustering
- system_j_ : BALL::PoseClustering
- system_molecular_weight : BALL::NMRStarFile::MolecularSystem
- system_name : BALL::NMRStarFile::MolecularSystem
- system_oligomer_state : BALL::NMRStarFile::MolecularSystem
- system_origin_ : BALL::VIEW::Scene
- system_paramagnetic : BALL::NMRStarFile::MolecularSystem
- system_physical_state : BALL::NMRStarFile::MolecularSystem
- system_ptr_ : BALL::MolecularDynamics, BALL::SnapShotManager
- system_thiol_state : BALL::NMRStarFile::MolecularSystem